Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC026434.2-201ENST00000506094 1078 ntBASIC10.36□□□□□ -0.75
RPL39P62891 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.36□□□□□ -0.75
RPL39P62891 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 AP000344.2-201ENST00000512987 629 ntBASIC10.36□□□□□ -0.75
RPL39P62891 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.36□□□□□ -0.75
RPL39P62891 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.36□□□□□ -0.75
RPL39P62891 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RPL39P62891 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.36□□□□□ -0.75
RPL39P62891 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RPL39P62891 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
RPL39P62891 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.36□□□□□ -0.75
RPL39P62891 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 PCDHA6-201ENST00000378126 3267 ntBASIC10.36□□□□□ -0.75
RPL39P62891 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
RPL39P62891 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.35□□□□□ -0.75
RPL39P62891 NCLP1-201ENST00000445357 1963 ntBASIC10.35□□□□□ -0.75
RPL39P62891 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC10.35□□□□□ -0.75
RPL39P62891 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 MRPL37P1-201ENST00000592451 1337 ntBASIC10.35□□□□□ -0.75
RPL39P62891 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 AC118758.2-201ENST00000614242 2813 ntBASIC10.35□□□□□ -0.75
RPL39P62891 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 C2-206ENST00000442278 2434 ntTSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.35□□□□□ -0.75
RPL39P62891 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
RPL39P62891 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.35□□□□□ -0.75
RPL39P62891 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.35□□□□□ -0.75
RPL39P62891 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.35□□□□□ -0.75
RPL39P62891 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.35□□□□□ -0.75
RPL39P62891 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 POLD2P1-201ENST00000511220 997 ntBASIC10.35□□□□□ -0.75
RPL39P62891 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
RPL39P62891 DUX4L47-201ENST00000566374 394 ntBASIC10.35□□□□□ -0.75
RPL39P62891 AL596442.2-201ENST00000610240 980 ntBASIC10.35□□□□□ -0.75
RPL39P62891 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC10.35□□□□□ -0.75
RPL39P62891 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.35□□□□□ -0.75
RPL39P62891 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.35□□□□□ -0.75
RPL39P62891 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
RPL39P62891 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 AC003102.2-201ENST00000589195 1469 ntBASIC10.35□□□□□ -0.75
RPL39P62891 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RPL39P62891 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
RPL39P62891 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms