Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDN6P56747 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN6P56747 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CLDN6P56747 RN7SKP109-201ENST00000410592 316 ntBASIC13.95□□□□□ -0.18
CLDN6P56747 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN6P56747 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.95□□□□□ -0.18
CLDN6P56747 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN6P56747 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN6P56747 AC114947.1-202ENST00000514136 344 ntBASIC13.95□□□□□ -0.18
CLDN6P56747 AP000911.2-201ENST00000534330 502 ntBASIC13.95□□□□□ -0.18
CLDN6P56747 AC003686.1-201ENST00000550956 1034 ntBASIC13.95□□□□□ -0.18
CLDN6P56747 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.95□□□□□ -0.18
CLDN6P56747 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN6P56747 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN6P56747 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.95□□□□□ -0.18
CLDN6P56747 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN6P56747 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.95□□□□□ -0.18
CLDN6P56747 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN6P56747 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN6P56747 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDN6P56747 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN6P56747 AC112693.3-201ENST00000624819 1983 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
CLDN6P56747 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN6P56747 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLDN6P56747 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN6P56747 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 HLA-DMA-203ENST00000395305 777 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN6P56747 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN6P56747 RN7SL530P-201ENST00000485097 298 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN6P56747 PGAM1P12-201ENST00000505622 748 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 RNA5SP417-201ENST00000516459 108 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 HERC2P11-201ENST00000562845 725 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 AC100756.2-201ENST00000569537 736 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 FO393412.1-201ENST00000619841 382 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN6P56747 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 AC097376.2-205ENST00000610159 5334 ntBASIC13.94□□□□□ -0.18
CLDN6P56747 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN6P56747 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN6P56747 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 AC006486.2-201ENST00000624246 2199 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 OR2I1P-210ENST00000642037 4691 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 BAK1P1-201ENST00000317045 636 ntBASIC13.93□□□□□ -0.18
CLDN6P56747 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CLDN6P56747 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN6P56747 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN6P56747 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN6P56747 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN6P56747 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN6P56747 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 852.9 ms