Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.16□□□□□ -0.3
SUMO3P55854 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.16□□□□□ -0.3
SUMO3P55854 AC013355.1-201ENST00000562625 723 ntBASIC13.16□□□□□ -0.3
SUMO3P55854 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.16□□□□□ -0.3
SUMO3P55854 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 AL132994.2-201ENST00000603120 687 ntBASIC13.16□□□□□ -0.3
SUMO3P55854 AC090164.2-201ENST00000611487 516 ntBASIC13.16□□□□□ -0.3
SUMO3P55854 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 AC018629.1-201ENST00000623381 1736 ntBASIC13.16□□□□□ -0.3
SUMO3P55854 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.15□□□□□ -0.3
SUMO3P55854 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.15□□□□□ -0.3
SUMO3P55854 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SUMO3P55854 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
SUMO3P55854 DPM3-202ENST00000368399 517 ntBASIC13.15□□□□□ -0.3
SUMO3P55854 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.15□□□□□ -0.3
SUMO3P55854 OR2R1P-201ENST00000441404 914 ntBASIC13.15□□□□□ -0.3
SUMO3P55854 AC104306.2-201ENST00000451877 341 ntBASIC13.15□□□□□ -0.3
SUMO3P55854 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.15□□□□□ -0.3
SUMO3P55854 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.15□□□□□ -0.3
SUMO3P55854 RN7SL219P-201ENST00000582872 296 ntBASIC13.15□□□□□ -0.3
SUMO3P55854 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.15□□□□□ -0.3
SUMO3P55854 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.15□□□□□ -0.3
SUMO3P55854 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.15□□□□□ -0.3
SUMO3P55854 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 AL022328.3-201ENST00000607943 679 ntBASIC13.15□□□□□ -0.3
SUMO3P55854 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 AC136759.1-202ENST00000530858 2194 ntBASIC13.15□□□□□ -0.3
SUMO3P55854 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SUMO3P55854 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SUMO3P55854 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
SUMO3P55854 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SUMO3P55854 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
SUMO3P55854 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SUMO3P55854 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.14□□□□□ -0.31
SUMO3P55854 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 AC018735.1-201ENST00000437208 1502 ntBASIC13.14□□□□□ -0.31
SUMO3P55854 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SUMO3P55854 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SUMO3P55854 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.14□□□□□ -0.31
SUMO3P55854 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.14□□□□□ -0.31
SUMO3P55854 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.14□□□□□ -0.31
SUMO3P55854 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.14□□□□□ -0.31
SUMO3P55854 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.14□□□□□ -0.31
SUMO3P55854 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.14□□□□□ -0.31
SUMO3P55854 MARK2P5-201ENST00000507649 634 ntBASIC13.14□□□□□ -0.31
SUMO3P55854 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.14□□□□□ -0.31
SUMO3P55854 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SUMO3P55854 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.14□□□□□ -0.31
SUMO3P55854 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms