Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB28P51157 AC018629.1-201ENST00000623381 1736 ntBASIC14.05□□□□□ -0.16
RAB28P51157 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB28P51157 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 AC016700.1-201ENST00000429424 312 ntBASIC14.05□□□□□ -0.16
RAB28P51157 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 BX284668.4-201ENST00000453917 508 ntBASIC14.05□□□□□ -0.16
RAB28P51157 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 AC125604.1-201ENST00000496255 707 ntBASIC14.05□□□□□ -0.16
RAB28P51157 AC022217.1-201ENST00000521069 738 ntBASIC14.05□□□□□ -0.16
RAB28P51157 PGAM1P5-201ENST00000548011 764 ntBASIC14.05□□□□□ -0.16
RAB28P51157 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB28P51157 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RAB28P51157 MIR3615-201ENST00000581999 87 ntBASIC14.05□□□□□ -0.16
RAB28P51157 AC021016.3-201ENST00000608367 477 ntBASIC14.05□□□□□ -0.16
RAB28P51157 MIR6787-201ENST00000616675 61 ntBASIC14.05□□□□□ -0.16
RAB28P51157 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RAB28P51157 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 AC007191.1-201ENST00000623179 2995 ntBASIC14.05□□□□□ -0.16
RAB28P51157 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB28P51157 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB28P51157 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB28P51157 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 AL008707.1-201ENST00000422498 534 ntBASIC14.04□□□□□ -0.16
RAB28P51157 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB28P51157 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB28P51157 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB28P51157 AKR7A2P1-201ENST00000460134 915 ntBASIC14.04□□□□□ -0.16
RAB28P51157 RCC2P8-201ENST00000502779 1035 ntBASIC14.04□□□□□ -0.16
RAB28P51157 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB28P51157 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RAB28P51157 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.04□□□□□ -0.16
RAB28P51157 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB28P51157 AC026740.1-201ENST00000607068 791 ntBASIC14.04□□□□□ -0.16
RAB28P51157 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RAB28P51157 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.04□□□□□ -0.16
RAB28P51157 AC139749.1-202ENST00000617529 3139 ntBASIC14.04□□□□□ -0.16
RAB28P51157 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 LAP3P2-201ENST00000454686 1454 ntBASIC14.04□□□□□ -0.16
RAB28P51157 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RAB28P51157 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB28P51157 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB28P51157 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB28P51157 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB28P51157 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB28P51157 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB28P51157 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB28P51157 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB28P51157 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms