Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RNF144AP50876 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RNF144AP50876 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 MBLAC2-202ENST00000514906 1936 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RNF144AP50876 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 ANKRD19P-201ENST00000338192 862 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF144AP50876 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF144AP50876 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
RNF144AP50876 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RNF144AP50876 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 FTLP10-202ENST00000505798 471 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 RNA5SP486-201ENST00000515961 83 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 AC131206.1-201ENST00000538078 1211 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 SNX29P1-201ENST00000548357 1007 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 AC106820.3-201ENST00000561653 397 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC13.65□□□□□ -0.22
RNF144AP50876 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF144AP50876 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF144AP50876 KRT8P4-201ENST00000509735 1454 ntBASIC13.65□□□□□ -0.22
RNF144AP50876 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.65□□□□□ -0.22
RNF144AP50876 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF144AP50876 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RNF144AP50876 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF144AP50876 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RNF144AP50876 MRPL37P1-201ENST00000592451 1337 ntBASIC13.64□□□□□ -0.23
RNF144AP50876 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RNF144AP50876 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF144AP50876 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 FAM8A4P-201ENST00000435433 1213 ntBASIC13.64□□□□□ -0.23
RNF144AP50876 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.64□□□□□ -0.23
RNF144AP50876 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF144AP50876 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF144AP50876 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF144AP50876 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF144AP50876 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.64□□□□□ -0.23
RNF144AP50876 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RNF144AP50876 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
RNF144AP50876 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF144AP50876 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF144AP50876 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms