Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LHX2P50458 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 ELK2AP-201ENST00000392510 1007 ntBASIC12.95□□□□□ -0.34
LHX2P50458 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LHX2P50458 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.95□□□□□ -0.34
LHX2P50458 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 MIR6769A-201ENST00000617340 73 ntBASIC12.95□□□□□ -0.34
LHX2P50458 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 KRT8P19-201ENST00000551916 1455 ntBASIC12.95□□□□□ -0.34
LHX2P50458 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
LHX2P50458 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
LHX2P50458 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LHX2P50458 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LHX2P50458 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LHX2P50458 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.94□□□□□ -0.34
LHX2P50458 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.94□□□□□ -0.34
LHX2P50458 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.94□□□□□ -0.34
LHX2P50458 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.94□□□□□ -0.34
LHX2P50458 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.94□□□□□ -0.34
LHX2P50458 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.94□□□□□ -0.34
LHX2P50458 RN7SL258P-201ENST00000478664 300 ntBASIC12.94□□□□□ -0.34
LHX2P50458 RN7SL530P-201ENST00000485097 298 ntBASIC12.94□□□□□ -0.34
LHX2P50458 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.94□□□□□ -0.34
LHX2P50458 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 AC134698.3-201ENST00000523880 214 ntBASIC12.94□□□□□ -0.34
LHX2P50458 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.94□□□□□ -0.34
LHX2P50458 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 AL109837.1-201ENST00000603272 613 ntBASIC12.94□□□□□ -0.34
LHX2P50458 AC012044.1-201ENST00000603431 297 ntBASIC12.94□□□□□ -0.34
LHX2P50458 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.94□□□□□ -0.34
LHX2P50458 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.94□□□□□ -0.34
LHX2P50458 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LHX2P50458 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.94□□□□□ -0.34
LHX2P50458 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LHX2P50458 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LHX2P50458 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms