Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PSEN1P49768 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PSEN1P49768 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
PSEN1P49768 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.81■□□□□ 0.12
PSEN1P49768 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PSEN1P49768 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PSEN1P49768 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PSEN1P49768 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PSEN1P49768 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PSEN1P49768 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PSEN1P49768 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
PSEN1P49768 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
PSEN1P49768 TUBB1P2-201ENST00000422712 1306 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 TUBB1P1-201ENST00000503144 1300 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 SNORA72.3-201ENST00000365074 132 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.8■□□□□ 0.12
PSEN1P49768 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 MIR1202-201ENST00000408529 83 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.8■□□□□ 0.12
PSEN1P49768 FAM8A4P-201ENST00000435433 1213 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 MESTP3-201ENST00000503460 968 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 UBE2V1P12-201ENST00000503954 474 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 FTLP10-202ENST00000505798 471 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 AC026434.2-201ENST00000506094 1078 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC15.8■□□□□ 0.12
PSEN1P49768 AL583810.1-201ENST00000553344 1045 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 ZNF92P3-201ENST00000596594 954 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 AC120349.3-201ENST00000624377 529 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC15.8■□□□□ 0.12
PSEN1P49768 AC136428.4-201ENST00000634254 1155 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.8■□□□□ 0.12
PSEN1P49768 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.8■□□□□ 0.12
PSEN1P49768 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 AC067930.6-201ENST00000623257 4947 ntBASIC15.8■□□□□ 0.12
PSEN1P49768 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PSEN1P49768 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PSEN1P49768 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PSEN1P49768 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PSEN1P49768 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PSEN1P49768 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PSEN1P49768 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.79■□□□□ 0.12
PSEN1P49768 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.79■□□□□ 0.12
PSEN1P49768 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PSEN1P49768 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC15.79■□□□□ 0.12
PSEN1P49768 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PSEN1P49768 NORAD-201ENST00000565493 5339 ntBASIC15.79■□□□□ 0.12
PSEN1P49768 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PSEN1P49768 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PSEN1P49768 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.79■□□□□ 0.12
PSEN1P49768 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PSEN1P49768 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
PSEN1P49768 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PSEN1P49768 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PSEN1P49768 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PSEN1P49768 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.79■□□□□ 0.12
PSEN1P49768 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PSEN1P49768 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.79■□□□□ 0.12
PSEN1P49768 RNU4-40P-201ENST00000364351 143 ntBASIC15.79■□□□□ 0.12
PSEN1P49768 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.79■□□□□ 0.12
PSEN1P49768 NOC2LP1-201ENST00000450578 752 ntBASIC15.79■□□□□ 0.12
PSEN1P49768 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.79■□□□□ 0.12
PSEN1P49768 ADAM20P2-201ENST00000515830 1273 ntBASIC15.79■□□□□ 0.12
PSEN1P49768 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.79■□□□□ 0.12
PSEN1P49768 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PSEN1P49768 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.79■□□□□ 0.12
PSEN1P49768 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.79■□□□□ 0.12
PSEN1P49768 AC010328.2-201ENST00000597698 1111 ntBASIC15.79■□□□□ 0.12
PSEN1P49768 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.79■□□□□ 0.12
PSEN1P49768 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PSEN1P49768 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms