Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC136759.1-202ENST00000530858 2194 ntBASIC13.35□□□□□ -0.27
CENPAP49450 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
CENPAP49450 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CENPAP49450 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CENPAP49450 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CENPAP49450 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.35□□□□□ -0.27
CENPAP49450 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 KLF2P2-201ENST00000416807 1039 ntBASIC13.35□□□□□ -0.27
CENPAP49450 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.35□□□□□ -0.27
CENPAP49450 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.35□□□□□ -0.27
CENPAP49450 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.35□□□□□ -0.27
CENPAP49450 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.35□□□□□ -0.27
CENPAP49450 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.35□□□□□ -0.27
CENPAP49450 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.35□□□□□ -0.27
CENPAP49450 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.35□□□□□ -0.27
CENPAP49450 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CENPAP49450 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 SALL4P5-201ENST00000419001 1760 ntBASIC13.35□□□□□ -0.27
CENPAP49450 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.35□□□□□ -0.27
CENPAP49450 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CENPAP49450 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CENPAP49450 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.34□□□□□ -0.27
CENPAP49450 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CENPAP49450 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CENPAP49450 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
CENPAP49450 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.34□□□□□ -0.27
CENPAP49450 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CENPAP49450 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.34□□□□□ -0.27
CENPAP49450 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.34□□□□□ -0.27
CENPAP49450 AC026434.2-201ENST00000506094 1078 ntBASIC13.34□□□□□ -0.27
CENPAP49450 KRT18P25-201ENST00000508931 1278 ntBASIC13.34□□□□□ -0.27
CENPAP49450 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.34□□□□□ -0.27
CENPAP49450 AC027796.2-201ENST00000575326 344 ntBASIC13.34□□□□□ -0.27
CENPAP49450 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CENPAP49450 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.34□□□□□ -0.27
CENPAP49450 MIR6074-201ENST00000612054 107 ntBASIC13.34□□□□□ -0.27
CENPAP49450 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.34□□□□□ -0.27
CENPAP49450 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CENPAP49450 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CENPAP49450 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms