Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RFC5P40937 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RFC5P40937 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.04■□□□□ 0.16
RFC5P40937 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.04■□□□□ 0.16
RFC5P40937 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.04■□□□□ 0.16
RFC5P40937 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.04■□□□□ 0.16
RFC5P40937 NUP210P1-202ENST00000504322 710 ntBASIC16.04■□□□□ 0.16
RFC5P40937 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.04■□□□□ 0.16
RFC5P40937 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.04■□□□□ 0.16
RFC5P40937 RN7SL574P-201ENST00000581512 297 ntBASIC16.04■□□□□ 0.16
RFC5P40937 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC5P40937 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC5P40937 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RFC5P40937 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 AC015802.1-201ENST00000588104 1449 ntBASIC16.03■□□□□ 0.16
RFC5P40937 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 FRMPD2B-201ENST00000431305 1347 ntBASIC16.03■□□□□ 0.16
RFC5P40937 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFC5P40937 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.03■□□□□ 0.16
RFC5P40937 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC5P40937 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC5P40937 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC5P40937 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 CHMP4BP1-201ENST00000556017 588 ntBASIC16.03■□□□□ 0.16
RFC5P40937 AC140658.4-201ENST00000561990 352 ntBASIC16.03■□□□□ 0.16
RFC5P40937 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC5P40937 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.03■□□□□ 0.16
RFC5P40937 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC5P40937 AC097724.1-201ENST00000609581 426 ntBASIC16.03■□□□□ 0.16
RFC5P40937 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 LINC01165-201ENST00000445190 1623 ntBASIC16.03■□□□□ 0.16
RFC5P40937 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 AC106881.1-201ENST00000605849 3329 ntBASIC16.03■□□□□ 0.16
RFC5P40937 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC5P40937 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RFC5P40937 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 AC090505.1-201ENST00000430515 1834 ntBASIC16.03■□□□□ 0.16
RFC5P40937 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC5P40937 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC5P40937 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.02■□□□□ 0.16
RFC5P40937 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RFC5P40937 AC140479.7-201ENST00000636301 2332 ntBASIC16.02■□□□□ 0.16
RFC5P40937 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
RFC5P40937 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
RFC5P40937 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC5P40937 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC5P40937 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RFC5P40937 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC5P40937 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC5P40937 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 PDIA3P2-201ENST00000428073 158 ntBASIC16.02■□□□□ 0.16
RFC5P40937 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC5P40937 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.02■□□□□ 0.16
RFC5P40937 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.02■□□□□ 0.16
RFC5P40937 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC5P40937 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms