Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC139712.1-201ENST00000378256 1875 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
CEACAM3P40198 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC023908.3-201ENST00000564211 3047 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
CEACAM3P40198 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
CEACAM3P40198 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.96□□□□□ -0.49
CEACAM3P40198 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.96□□□□□ -0.49
CEACAM3P40198 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 OR2I1P-208ENST00000641137 4948 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
CEACAM3P40198 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.96□□□□□ -0.49
CEACAM3P40198 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 AC010141.1-201ENST00000411585 623 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 BTBD6P1-201ENST00000412176 1267 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 MTX1P1-201ENST00000440904 838 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 HIST2H2BB-201ENST00000449108 381 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 AC119751.2-201ENST00000504529 210 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.96□□□□□ -0.49
CEACAM3P40198 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CEACAM3P40198 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 RN7SL560P-201ENST00000577943 264 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 MIR4741-201ENST00000579822 90 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.96□□□□□ -0.49
CEACAM3P40198 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.96□□□□□ -0.49
CEACAM3P40198 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.96□□□□□ -0.49
CEACAM3P40198 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.96□□□□□ -0.49
CEACAM3P40198 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.96□□□□□ -0.49
CEACAM3P40198 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CEACAM3P40198 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.96□□□□□ -0.49
CEACAM3P40198 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.96□□□□□ -0.5
CEACAM3P40198 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CEACAM3P40198 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.96□□□□□ -0.5
CEACAM3P40198 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
CEACAM3P40198 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CEACAM3P40198 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.96□□□□□ -0.5
CEACAM3P40198 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.96□□□□□ -0.5
CEACAM3P40198 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
CEACAM3P40198 PTENP1-202ENST00000532280 3996 ntBASIC11.95□□□□□ -0.5
CEACAM3P40198 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms