Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC006453.1-201ENST00000636037 1257 ntBASIC14.3□□□□□ -0.12
TRIM23P36406 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM23P36406 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 LAP3P2-201ENST00000454686 1454 ntBASIC14.3□□□□□ -0.12
TRIM23P36406 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM23P36406 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM23P36406 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM23P36406 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM23P36406 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
TRIM23P36406 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 AL390755.1-201ENST00000623716 2027 ntBASIC14.29□□□□□ -0.12
TRIM23P36406 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 SNX18-202ENST00000343017 3140 ntBASIC14.29□□□□□ -0.12
TRIM23P36406 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.29□□□□□ -0.12
TRIM23P36406 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM23P36406 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM23P36406 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 AC116345.2-201ENST00000512837 523 ntBASIC14.29□□□□□ -0.12
TRIM23P36406 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.29□□□□□ -0.12
TRIM23P36406 AC140658.4-201ENST00000561990 352 ntBASIC14.29□□□□□ -0.12
TRIM23P36406 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 PHBP15-201ENST00000574228 665 ntBASIC14.29□□□□□ -0.12
TRIM23P36406 MIR3907-201ENST00000579424 151 ntBASIC14.29□□□□□ -0.12
TRIM23P36406 AC084346.2-201ENST00000607097 949 ntBASIC14.29□□□□□ -0.12
TRIM23P36406 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 AC015909.3-201ENST00000572855 1794 ntBASIC14.29□□□□□ -0.12
TRIM23P36406 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM23P36406 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM23P36406 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM23P36406 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM23P36406 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRIM23P36406 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIM23P36406 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRIM23P36406 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM23P36406 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 BANF1P3-201ENST00000412556 261 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms