Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
KRT20P35900 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
KRT20P35900 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
KRT20P35900 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
KRT20P35900 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.97□□□□□ -0.17
KRT20P35900 BCRP2-202ENST00000447763 634 ntBASIC13.97□□□□□ -0.17
KRT20P35900 GAPDHP21-201ENST00000450301 1010 ntBASIC13.97□□□□□ -0.17
KRT20P35900 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
KRT20P35900 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.97□□□□□ -0.17
KRT20P35900 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.97□□□□□ -0.17
KRT20P35900 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 BCRP6-201ENST00000510112 632 ntBASIC13.97□□□□□ -0.17
KRT20P35900 BCRP7-201ENST00000511549 544 ntBASIC13.97□□□□□ -0.17
KRT20P35900 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 AP001889.1-201ENST00000525414 633 ntBASIC13.97□□□□□ -0.17
KRT20P35900 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
KRT20P35900 BTNL10-201ENST00000595971 695 ntBASIC13.97□□□□□ -0.17
KRT20P35900 AC008735.3-201ENST00000596646 500 ntBASIC13.97□□□□□ -0.17
KRT20P35900 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
KRT20P35900 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.97□□□□□ -0.17
KRT20P35900 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
KRT20P35900 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
KRT20P35900 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT20P35900 TCAF1P1-201ENST00000414990 2232 ntBASIC13.96□□□□□ -0.17
KRT20P35900 DGCR9-201ENST00000609630 2415 ntBASIC13.96□□□□□ -0.17
KRT20P35900 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT20P35900 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
KRT20P35900 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
KRT20P35900 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
KRT20P35900 MSTO2P-201ENST00000314835 1709 ntBASIC13.96□□□□□ -0.17
KRT20P35900 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
KRT20P35900 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.96□□□□□ -0.17
KRT20P35900 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT20P35900 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT20P35900 TPT1P11-201ENST00000458482 498 ntBASIC13.96□□□□□ -0.17
KRT20P35900 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.96□□□□□ -0.17
KRT20P35900 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.96□□□□□ -0.17
KRT20P35900 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.96□□□□□ -0.17
KRT20P35900 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.96□□□□□ -0.17
KRT20P35900 AL035252.4-201ENST00000624174 288 ntBASIC13.96□□□□□ -0.17
KRT20P35900 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
KRT20P35900 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
KRT20P35900 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT20P35900 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT20P35900 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT20P35900 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT20P35900 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.96□□□□□ -0.18
KRT20P35900 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.96□□□□□ -0.18
KRT20P35900 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.96□□□□□ -0.18
KRT20P35900 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT20P35900 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.96□□□□□ -0.18
KRT20P35900 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
KRT20P35900 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
KRT20P35900 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT20P35900 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
KRT20P35900 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KRT20P35900 AC018665.1-201ENST00000622927 1362 ntBASIC13.96□□□□□ -0.18
KRT20P35900 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
KRT20P35900 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT20P35900 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT20P35900 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
KRT20P35900 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms