Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.6■□□□□ 0.25
COPB2P35606 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COPB2P35606 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
COPB2P35606 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.6■□□□□ 0.25
COPB2P35606 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
COPB2P35606 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COPB2P35606 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 CICP23-201ENST00000605013 2741 ntBASIC16.6■□□□□ 0.25
COPB2P35606 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 LINC00528-201ENST00000600723 2160 ntBASIC16.6■□□□□ 0.25
COPB2P35606 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
COPB2P35606 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.59■□□□□ 0.25
COPB2P35606 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COPB2P35606 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.59■□□□□ 0.25
COPB2P35606 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.59■□□□□ 0.25
COPB2P35606 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.59■□□□□ 0.25
COPB2P35606 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.59■□□□□ 0.25
COPB2P35606 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.59■□□□□ 0.25
COPB2P35606 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.59■□□□□ 0.25
COPB2P35606 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.59■□□□□ 0.25
COPB2P35606 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.59■□□□□ 0.25
COPB2P35606 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.59■□□□□ 0.25
COPB2P35606 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
COPB2P35606 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
COPB2P35606 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.59■□□□□ 0.25
COPB2P35606 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.59■□□□□ 0.25
COPB2P35606 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
COPB2P35606 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
COPB2P35606 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
COPB2P35606 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.59■□□□□ 0.25
COPB2P35606 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COPB2P35606 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.58■□□□□ 0.25
COPB2P35606 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.58■□□□□ 0.25
COPB2P35606 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COPB2P35606 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
COPB2P35606 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COPB2P35606 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
COPB2P35606 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
COPB2P35606 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
COPB2P35606 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
COPB2P35606 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
COPB2P35606 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 KRT17P5-201ENST00000332088 839 ntBASIC16.58■□□□□ 0.24
COPB2P35606 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.58■□□□□ 0.24
COPB2P35606 ORAOV1P1-201ENST00000503108 395 ntBASIC16.58■□□□□ 0.24
COPB2P35606 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.58■□□□□ 0.24
COPB2P35606 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 MIR4649-201ENST00000582839 64 ntBASIC16.58■□□□□ 0.24
COPB2P35606 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.58■□□□□ 0.24
COPB2P35606 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.58■□□□□ 0.24
COPB2P35606 MIR6842-201ENST00000612539 65 ntBASIC16.58■□□□□ 0.24
COPB2P35606 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
COPB2P35606 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
COPB2P35606 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.58■□□□□ 0.24
COPB2P35606 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
COPB2P35606 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
COPB2P35606 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPB2P35606 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COPB2P35606 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPB2P35606 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms