Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 GAPDHP40-201ENST00000505218 1006 ntBASIC14.66□□□□□ -0.06
LSP1P33241 KRT8P48-201ENST00000515599 1220 ntBASIC14.66□□□□□ -0.06
LSP1P33241 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.66□□□□□ -0.06
LSP1P33241 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.66□□□□□ -0.06
LSP1P33241 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LSP1P33241 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.66□□□□□ -0.06
LSP1P33241 AC091812.2-201ENST00000619081 385 ntBASIC14.66□□□□□ -0.06
LSP1P33241 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LSP1P33241 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LSP1P33241 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSP1P33241 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LSP1P33241 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LSP1P33241 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LSP1P33241 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSP1P33241 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LSP1P33241 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.66□□□□□ -0.06
LSP1P33241 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSP1P33241 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.66□□□□□ -0.06
LSP1P33241 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSP1P33241 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LSP1P33241 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LSP1P33241 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LSP1P33241 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.65□□□□□ -0.06
LSP1P33241 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LSP1P33241 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LSP1P33241 TRIM80P-201ENST00000455685 2848 ntBASIC14.65□□□□□ -0.06
LSP1P33241 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.65□□□□□ -0.06
LSP1P33241 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 AC040169.1-201ENST00000565382 521 ntBASIC14.65□□□□□ -0.06
LSP1P33241 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.65□□□□□ -0.06
LSP1P33241 RN7SL828P-201ENST00000607615 303 ntBASIC14.65□□□□□ -0.06
LSP1P33241 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LSP1P33241 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 ABCD1P2-201ENST00000429313 1601 ntBASIC14.65□□□□□ -0.06
LSP1P33241 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LSP1P33241 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.65□□□□□ -0.06
LSP1P33241 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LSP1P33241 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.65□□□□□ -0.06
LSP1P33241 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 AL645937.6-201ENST00000641122 3727 ntBASIC14.65□□□□□ -0.06
LSP1P33241 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LSP1P33241 AC104758.3-203ENST00000562938 2123 ntBASIC14.65□□□□□ -0.06
LSP1P33241 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LSP1P33241 AL022313.4-201ENST00000562756 2046 ntBASIC14.65□□□□□ -0.06
LSP1P33241 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.65□□□□□ -0.07
LSP1P33241 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LSP1P33241 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC14.64□□□□□ -0.07
LSP1P33241 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.64□□□□□ -0.07
LSP1P33241 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 PCDHB17P-202ENST00000623466 3066 ntBASIC14.64□□□□□ -0.07
LSP1P33241 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LSP1P33241 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 MIR574-201ENST00000385209 96 ntBASIC14.64□□□□□ -0.07
LSP1P33241 AL645937.2-201ENST00000396808 931 ntBASIC14.64□□□□□ -0.07
LSP1P33241 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.64□□□□□ -0.07
LSP1P33241 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
LSP1P33241 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LSP1P33241 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.64□□□□□ -0.07
LSP1P33241 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
LSP1P33241 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.64□□□□□ -0.07
LSP1P33241 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.64□□□□□ -0.07
LSP1P33241 AC026120.1-201ENST00000611536 926 ntBASIC14.64□□□□□ -0.07
LSP1P33241 AC018529.1-201ENST00000613063 361 ntBASIC14.64□□□□□ -0.07
LSP1P33241 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.64□□□□□ -0.07
LSP1P33241 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.64□□□□□ -0.07
LSP1P33241 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.64□□□□□ -0.07
LSP1P33241 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LSP1P33241 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms