Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 RPL7P3-201ENST00000441388 714 ntBASIC13.85□□□□□ -0.19
PTPN6P29350 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 PUDPP3-201ENST00000445368 636 ntBASIC13.85□□□□□ -0.19
PTPN6P29350 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.85□□□□□ -0.19
PTPN6P29350 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.85□□□□□ -0.19
PTPN6P29350 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 AC133552.6-201ENST00000613406 534 ntBASIC13.85□□□□□ -0.19
PTPN6P29350 ENPP7P14-201ENST00000621765 1040 ntBASIC13.85□□□□□ -0.19
PTPN6P29350 COX11-210ENST00000639671 696 ntBASIC13.85□□□□□ -0.19
PTPN6P29350 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.85□□□□□ -0.19
PTPN6P29350 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PTPN6P29350 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.85□□□□□ -0.19
PTPN6P29350 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTPN6P29350 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PTPN6P29350 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PTPN6P29350 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 KRT8P28-201ENST00000433288 1390 ntBASIC13.84□□□□□ -0.19
PTPN6P29350 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.84□□□□□ -0.19
PTPN6P29350 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.84□□□□□ -0.19
PTPN6P29350 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.84□□□□□ -0.19
PTPN6P29350 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PTPN6P29350 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PTPN6P29350 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.84□□□□□ -0.19
PTPN6P29350 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.84□□□□□ -0.19
PTPN6P29350 KRT223P-202ENST00000449164 1292 ntBASIC13.84□□□□□ -0.19
PTPN6P29350 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 FTLP10-202ENST00000505798 471 ntBASIC13.84□□□□□ -0.19
PTPN6P29350 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.84□□□□□ -0.19
PTPN6P29350 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.84□□□□□ -0.19
PTPN6P29350 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.84□□□□□ -0.19
PTPN6P29350 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.84□□□□□ -0.19
PTPN6P29350 RN7SL48P-201ENST00000579283 293 ntBASIC13.84□□□□□ -0.19
PTPN6P29350 MIR4259-201ENST00000584466 101 ntBASIC13.84□□□□□ -0.19
PTPN6P29350 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.84□□□□□ -0.19
PTPN6P29350 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.84□□□□□ -0.19
PTPN6P29350 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.84□□□□□ -0.19
PTPN6P29350 AC132938.4-201ENST00000623835 848 ntBASIC13.84□□□□□ -0.19
PTPN6P29350 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.84□□□□□ -0.19
PTPN6P29350 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PTPN6P29350 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.84□□□□□ -0.19
PTPN6P29350 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.84□□□□□ -0.19
PTPN6P29350 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.84□□□□□ -0.19
PTPN6P29350 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms