Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LMO1P25800 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 MIR1202-201ENST00000408529 83 ntBASIC12.25□□□□□ -0.45
LMO1P25800 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO1P25800 AL161932.2-201ENST00000435436 679 ntBASIC12.25□□□□□ -0.45
LMO1P25800 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO1P25800 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.25□□□□□ -0.45
LMO1P25800 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO1P25800 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO1P25800 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.25□□□□□ -0.45
LMO1P25800 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 AC104506.1-201ENST00000609247 429 ntBASIC12.25□□□□□ -0.45
LMO1P25800 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
LMO1P25800 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 SHC1P1-201ENST00000425230 1745 ntBASIC12.25□□□□□ -0.45
LMO1P25800 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LMO1P25800 BEND3P3-201ENST00000611030 2440 ntBASIC12.25□□□□□ -0.45
LMO1P25800 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LMO1P25800 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
LMO1P25800 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
LMO1P25800 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.24□□□□□ -0.45
LMO1P25800 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LMO1P25800 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 AC112492.5-201ENST00000421897 457 ntBASIC12.24□□□□□ -0.45
LMO1P25800 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.24□□□□□ -0.45
LMO1P25800 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.24□□□□□ -0.45
LMO1P25800 CNN2P10-201ENST00000443067 918 ntBASIC12.24□□□□□ -0.45
LMO1P25800 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.24□□□□□ -0.45
LMO1P25800 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms