Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TNFSF4P23510 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
TNFSF4P23510 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TNFSF4P23510 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.53□□□□□ -0.4
TNFSF4P23510 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFSF4P23510 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFSF4P23510 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFSF4P23510 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 POM121L10P-201ENST00000436994 1285 ntBASIC12.53□□□□□ -0.4
TNFSF4P23510 AC012441.2-201ENST00000444843 739 ntBASIC12.53□□□□□ -0.4
TNFSF4P23510 HSPB1P2-201ENST00000448722 546 ntBASIC12.53□□□□□ -0.4
TNFSF4P23510 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFSF4P23510 TUBB8P8-201ENST00000458717 1058 ntBASIC12.53□□□□□ -0.4
TNFSF4P23510 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 RPSAP36-202ENST00000494591 1261 ntBASIC12.53□□□□□ -0.4
TNFSF4P23510 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.53□□□□□ -0.4
TNFSF4P23510 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFSF4P23510 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFSF4P23510 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.53□□□□□ -0.4
TNFSF4P23510 AC104982.3-201ENST00000581995 514 ntBASIC12.53□□□□□ -0.4
TNFSF4P23510 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.53□□□□□ -0.4
TNFSF4P23510 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFSF4P23510 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.53□□□□□ -0.4
TNFSF4P23510 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.53□□□□□ -0.4
TNFSF4P23510 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
TNFSF4P23510 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
TNFSF4P23510 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 AC009093.10-201ENST00000641956 1442 ntBASIC12.53□□□□□ -0.4
TNFSF4P23510 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TNFSF4P23510 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TNFSF4P23510 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.52□□□□□ -0.4
TNFSF4P23510 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TNFSF4P23510 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TNFSF4P23510 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TNFSF4P23510 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TNFSF4P23510 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms