Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.9■□□□□ 0.14
RFX1P22670 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.9■□□□□ 0.14
RFX1P22670 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.9■□□□□ 0.14
RFX1P22670 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 SORD2P-201ENST00000558556 1069 ntBASIC15.9■□□□□ 0.14
RFX1P22670 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.9■□□□□ 0.14
RFX1P22670 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.9■□□□□ 0.14
RFX1P22670 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.9■□□□□ 0.14
RFX1P22670 AC138649.2-201ENST00000615886 705 ntBASIC15.9■□□□□ 0.14
RFX1P22670 AC006453.4-201ENST00000636949 1252 ntBASIC15.9■□□□□ 0.14
RFX1P22670 AC128714.1-201ENST00000637035 887 ntBASIC15.9■□□□□ 0.14
RFX1P22670 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.9■□□□□ 0.14
RFX1P22670 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RFX1P22670 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.9■□□□□ 0.14
RFX1P22670 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.9■□□□□ 0.14
RFX1P22670 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.9■□□□□ 0.14
RFX1P22670 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RFX1P22670 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 POM121L10P-201ENST00000436994 1285 ntBASIC15.89■□□□□ 0.13
RFX1P22670 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.89■□□□□ 0.13
RFX1P22670 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.89■□□□□ 0.13
RFX1P22670 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.89■□□□□ 0.13
RFX1P22670 AL451050.2-201ENST00000606967 682 ntBASIC15.89■□□□□ 0.13
RFX1P22670 AC091544.8-201ENST00000619490 361 ntBASIC15.89■□□□□ 0.13
RFX1P22670 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RFX1P22670 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFX1P22670 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RFX1P22670 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFX1P22670 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX1P22670 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFX1P22670 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX1P22670 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFX1P22670 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFX1P22670 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFX1P22670 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.88■□□□□ 0.13
RFX1P22670 MAGEA5-201ENST00000446757 942 ntBASIC15.88■□□□□ 0.13
RFX1P22670 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.88■□□□□ 0.13
RFX1P22670 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.88■□□□□ 0.13
RFX1P22670 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.88■□□□□ 0.13
RFX1P22670 MIR4706-201ENST00000582134 82 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms