Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 GCOM2-201ENST00000509133 1104 ntBASIC14.1□□□□□ -0.15
CAPN3P20807 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 AC124283.3-201ENST00000570869 594 ntBASIC14.1□□□□□ -0.15
CAPN3P20807 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPN3P20807 MIR4538-201ENST00000581377 78 ntBASIC14.1□□□□□ -0.15
CAPN3P20807 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CAPN3P20807 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CAPN3P20807 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CAPN3P20807 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 AC072061.1-201ENST00000569710 2234 ntBASIC14.1□□□□□ -0.15
CAPN3P20807 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 AC020658.7-201ENST00000624274 2442 ntBASIC14.1□□□□□ -0.15
CAPN3P20807 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPN3P20807 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CAPN3P20807 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPN3P20807 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 AC020907.1-201ENST00000616460 1350 ntBASIC14.09□□□□□ -0.15
CAPN3P20807 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CAPN3P20807 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN3P20807 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CAPN3P20807 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CAPN3P20807 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CAPN3P20807 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPN3P20807 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.09□□□□□ -0.15
CAPN3P20807 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.09□□□□□ -0.15
CAPN3P20807 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPN3P20807 AC103988.2-201ENST00000561804 725 ntBASIC14.09□□□□□ -0.15
CAPN3P20807 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN3P20807 RRP7BP-205ENST00000566851 833 ntBASIC14.09□□□□□ -0.15
CAPN3P20807 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPN3P20807 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPN3P20807 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 TMEM261P1-201ENST00000604899 340 ntBASIC14.09□□□□□ -0.15
CAPN3P20807 MIR8072-201ENST00000614241 80 ntBASIC14.09□□□□□ -0.15
CAPN3P20807 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPN3P20807 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
CAPN3P20807 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 KHSRPP1-201ENST00000427983 1768 ntBASIC14.09□□□□□ -0.15
CAPN3P20807 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPN3P20807 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN3P20807 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.08□□□□□ -0.15
CAPN3P20807 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CAPN3P20807 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN3P20807 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN3P20807 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN3P20807 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN3P20807 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.08□□□□□ -0.15
CAPN3P20807 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.08□□□□□ -0.15
CAPN3P20807 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CAPN3P20807 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms