Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NCLP19338 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
NCLP19338 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.5■□□□□ 0.39
NCLP19338 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.5■□□□□ 0.39
NCLP19338 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 GNAQP1-201ENST00000444815 1067 ntBASIC17.5■□□□□ 0.39
NCLP19338 API5-211ENST00000534695 560 ntTSL 5 BASIC17.5■□□□□ 0.39
NCLP19338 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.5■□□□□ 0.39
NCLP19338 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.5■□□□□ 0.39
NCLP19338 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 AC004790.1-201ENST00000612686 536 ntBASIC17.5■□□□□ 0.39
NCLP19338 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC17.5■□□□□ 0.39
NCLP19338 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 AC027612.1-201ENST00000445234 2395 ntBASIC17.5■□□□□ 0.39
NCLP19338 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 AC016397.2-201ENST00000624848 1985 ntBASIC17.49■□□□□ 0.39
NCLP19338 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.49■□□□□ 0.39
NCLP19338 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 SPDYE18-201ENST00000510091 1050 ntBASIC17.49■□□□□ 0.39
NCLP19338 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.49■□□□□ 0.39
NCLP19338 DOC2GP-202ENST00000514950 1163 ntBASIC17.49■□□□□ 0.39
NCLP19338 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 AL596325.1-201ENST00000563991 1082 ntBASIC17.49■□□□□ 0.39
NCLP19338 TP53TG3HP-202ENST00000569755 579 ntBASIC17.49■□□□□ 0.39
NCLP19338 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
NCLP19338 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.49■□□□□ 0.39
NCLP19338 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NCLP19338 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.49■□□□□ 0.39
NCLP19338 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 TP73-201ENST00000346387 4854 ntTSL 5 BASIC17.49■□□□□ 0.39
NCLP19338 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCLP19338 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.48■□□□□ 0.39
NCLP19338 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NCLP19338 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NCLP19338 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCLP19338 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms