Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AL359711.2-201ENST00000563105 872 ntBASIC12.41□□□□□ -0.42
HIST1H1DP16402 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 AC099568.2-201ENST00000609194 695 ntBASIC12.41□□□□□ -0.42
HIST1H1DP16402 BX088702.1-201ENST00000610784 235 ntBASIC12.41□□□□□ -0.42
HIST1H1DP16402 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 NCLP1-201ENST00000445357 1963 ntBASIC12.41□□□□□ -0.42
HIST1H1DP16402 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 AL356585.2-201ENST00000625078 2396 ntBASIC12.41□□□□□ -0.42
HIST1H1DP16402 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H1DP16402 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H1DP16402 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 PCDHA5-203ENST00000614258 4248 ntBASIC12.4□□□□□ -0.42
HIST1H1DP16402 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.4□□□□□ -0.42
HIST1H1DP16402 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 ALG3P1-201ENST00000508806 1114 ntBASIC12.4□□□□□ -0.42
HIST1H1DP16402 AC093004.1-201ENST00000508850 424 ntBASIC12.4□□□□□ -0.42
HIST1H1DP16402 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 MIR8072-201ENST00000614241 80 ntBASIC12.4□□□□□ -0.42
HIST1H1DP16402 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 AC004241.5-201ENST00000623870 2448 ntBASIC12.4□□□□□ -0.42
HIST1H1DP16402 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 MIR497HG-202ENST00000572453 3838 ntBASIC12.4□□□□□ -0.42
HIST1H1DP16402 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H1DP16402 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
HIST1H1DP16402 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H1DP16402 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H1DP16402 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H1DP16402 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H1DP16402 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H1DP16402 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms