Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 AC092139.4-201ENST00000624318 2794 ntBASIC11.33□□□□□ -0.6
CXCL1P09341 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.33□□□□□ -0.6
CXCL1P09341 HIST3H2BA-201ENST00000436555 524 ntBASIC11.33□□□□□ -0.6
CXCL1P09341 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 KRT18P56-201ENST00000507275 550 ntBASIC11.33□□□□□ -0.6
CXCL1P09341 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 RN7SL510P-201ENST00000581311 263 ntBASIC11.33□□□□□ -0.6
CXCL1P09341 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 AC091812.2-201ENST00000619081 385 ntBASIC11.33□□□□□ -0.6
CXCL1P09341 AL513190.1-201ENST00000621254 727 ntBASIC11.33□□□□□ -0.6
CXCL1P09341 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.33□□□□□ -0.6
CXCL1P09341 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 AC073335.2-201ENST00000610177 3441 ntBASIC11.33□□□□□ -0.6
CXCL1P09341 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.33□□□□□ -0.6
CXCL1P09341 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 AC104109.2-201ENST00000602919 1418 ntBASIC11.33□□□□□ -0.6
CXCL1P09341 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CXCL1P09341 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.33□□□□□ -0.6
CXCL1P09341 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CXCL1P09341 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 AL391647.1-201ENST00000395664 511 ntBASIC11.32□□□□□ -0.6
CXCL1P09341 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.32□□□□□ -0.6
CXCL1P09341 AC003958.1-201ENST00000435883 421 ntBASIC11.32□□□□□ -0.6
CXCL1P09341 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 TARDBPP1-201ENST00000442013 1203 ntBASIC11.32□□□□□ -0.6
CXCL1P09341 AL591424.1-201ENST00000442569 1213 ntBASIC11.32□□□□□ -0.6
CXCL1P09341 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.32□□□□□ -0.6
CXCL1P09341 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.32□□□□□ -0.6
CXCL1P09341 RNA5SP416-201ENST00000516838 111 ntBASIC11.32□□□□□ -0.6
CXCL1P09341 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.32□□□□□ -0.6
CXCL1P09341 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.32□□□□□ -0.6
CXCL1P09341 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.32□□□□□ -0.6
CXCL1P09341 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
CXCL1P09341 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms