Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CD74P04233 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD74P04233 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
CD74P04233 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 MIR574-201ENST00000385209 96 ntBASIC12.28□□□□□ -0.44
CD74P04233 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.28□□□□□ -0.44
CD74P04233 RPL13AP25-201ENST00000484130 612 ntBASIC12.28□□□□□ -0.44
CD74P04233 KRT18P58-201ENST00000527480 1120 ntBASIC12.28□□□□□ -0.44
CD74P04233 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.28□□□□□ -0.44
CD74P04233 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.28□□□□□ -0.44
CD74P04233 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.28□□□□□ -0.44
CD74P04233 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.28□□□□□ -0.44
CD74P04233 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 ABCD1P2-201ENST00000429313 1601 ntBASIC12.28□□□□□ -0.44
CD74P04233 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CD74P04233 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CD74P04233 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CD74P04233 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD74P04233 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.27□□□□□ -0.44
CD74P04233 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.27□□□□□ -0.44
CD74P04233 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD74P04233 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CD74P04233 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD74P04233 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD74P04233 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
CD74P04233 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD74P04233 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD74P04233 AC125807.2-201ENST00000513358 3514 ntBASIC12.27□□□□□ -0.44
CD74P04233 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.27□□□□□ -0.44
CD74P04233 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CD74P04233 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CD74P04233 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.27□□□□□ -0.44
CD74P04233 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CD74P04233 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.27□□□□□ -0.45
CD74P04233 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 AL161932.2-201ENST00000435436 679 ntBASIC12.27□□□□□ -0.45
CD74P04233 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.27□□□□□ -0.45
CD74P04233 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.27□□□□□ -0.45
CD74P04233 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CD74P04233 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.27□□□□□ -0.45
CD74P04233 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.27□□□□□ -0.45
CD74P04233 MIR4469-201ENST00000583919 79 ntBASIC12.27□□□□□ -0.45
CD74P04233 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.27□□□□□ -0.45
CD74P04233 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CD74P04233 BX088702.1-201ENST00000610784 235 ntBASIC12.27□□□□□ -0.45
CD74P04233 GPALPP1-207ENST00000611650 899 ntBASIC12.27□□□□□ -0.45
CD74P04233 AC006538.3-201ENST00000612495 578 ntBASIC12.27□□□□□ -0.45
CD74P04233 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
CD74P04233 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.27□□□□□ -0.45
CD74P04233 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CD74P04233 AC010970.1-201ENST00000445125 1848 ntBASIC12.27□□□□□ -0.45
CD74P04233 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CD74P04233 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.27□□□□□ -0.45
CD74P04233 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CD74P04233 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CD74P04233 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.27□□□□□ -0.45
CD74P04233 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.27□□□□□ -0.45
CD74P04233 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD74P04233 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.26□□□□□ -0.45
CD74P04233 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms