Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.11■□□□□ 0.01
MSI1O43347 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.11■□□□□ 0.01
MSI1O43347 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 AC003686.1-201ENST00000550956 1034 ntBASIC15.11■□□□□ 0.01
MSI1O43347 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.11■□□□□ 0.01
MSI1O43347 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.11■□□□□ 0.01
MSI1O43347 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.11■□□□□ 0.01
MSI1O43347 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.11■□□□□ 0.01
MSI1O43347 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
MSI1O43347 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
MSI1O43347 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
MSI1O43347 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MSI1O43347 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.11■□□□□ 0.01
MSI1O43347 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
MSI1O43347 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.1■□□□□ 0.01
MSI1O43347 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.1■□□□□ 0.01
MSI1O43347 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.1■□□□□ 0.01
MSI1O43347 RN7SL11P-201ENST00000471305 293 ntBASIC15.1■□□□□ 0.01
MSI1O43347 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.1■□□□□ 0.01
MSI1O43347 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
MSI1O43347 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.1■□□□□ 0.01
MSI1O43347 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
MSI1O43347 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.1■□□□□ 0.01
MSI1O43347 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.1■□□□□ 0.01
MSI1O43347 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.1■□□□□ 0.01
MSI1O43347 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
MSI1O43347 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.1■□□□□ 0.01
MSI1O43347 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.1■□□□□ 0.01
MSI1O43347 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MSI1O43347 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MSI1O43347 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.09■□□□□ 0.01
MSI1O43347 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MSI1O43347 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MSI1O43347 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.09■□□□□ 0.01
MSI1O43347 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
MSI1O43347 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 RN7SKP214-201ENST00000364208 315 ntBASIC15.09■□□□□ 0.01
MSI1O43347 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
MSI1O43347 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.09■□□□□ 0.01
MSI1O43347 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.09■□□□□ 0.01
MSI1O43347 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 XBP1P1-201ENST00000436573 652 ntBASIC15.09■□□□□ 0.01
MSI1O43347 ST13P19-201ENST00000442505 1124 ntBASIC15.09■□□□□ 0.01
MSI1O43347 IGHJ2P-201ENST00000454480 60 ntBASIC15.09■□□□□ 0.01
MSI1O43347 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.09■□□□□ 0.01
MSI1O43347 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MSI1O43347 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.09■□□□□ 0.01
MSI1O43347 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.09■□□□□ 0.01
MSI1O43347 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.09■□□□□ 0.01
MSI1O43347 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.09■□□□□ 0.01
MSI1O43347 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.09■□□□□ 0.01
MSI1O43347 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.09■□□□□ 0.01
MSI1O43347 AC005586.2-201ENST00000563946 837 ntBASIC15.09■□□□□ 0.01
MSI1O43347 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
MSI1O43347 AC124068.2-201ENST00000569473 1109 ntBASIC15.09■□□□□ 0.01
MSI1O43347 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.09■□□□□ 0.01
MSI1O43347 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms