Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPA2E9PIF3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AL390755.1-201ENST00000623716 2027 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC244394.1-201ENST00000435000 1665 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC079328.1-201ENST00000560358 952 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC132192.2-201ENST00000596206 1147 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC008825.2-201ENST00000603374 718 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC097724.1-201ENST00000609581 426 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC091812.3-201ENST00000621362 345 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 DMBT1P1-203ENST00000636837 4628 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AL008718.2-201ENST00000609206 1313 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AC131212.3-201ENST00000624087 4219 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 AL136172.1-201ENST00000598590 1394 ntBASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA2E9PIF3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AC092506.1-202ENST00000401022 528 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 ACTG1P2-201ENST00000415776 1125 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 ACTG1P11-201ENST00000425411 1125 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AC012441.2-201ENST00000444843 739 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 KLF2P1-201ENST00000447438 1042 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms