Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.24□□□□□ -0.29
TMEM129A0AVI4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TMEM129A0AVI4 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
TMEM129A0AVI4 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AC004241.5-201ENST00000623870 2448 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AL136172.1-201ENST00000598590 1394 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 NUS1P3-201ENST00000423502 862 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 ATP5G2P4-201ENST00000442175 420 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 IGHV3-71-201ENST00000523324 359 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AP001063.1-201ENST00000568332 529 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AC233724.13-201ENST00000598383 410 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AL008721.1-201ENST00000609964 604 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AL138799.1-201ENST00000448213 1675 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 AC072061.1-201ENST00000569710 2234 ntBASIC13.23□□□□□ -0.29
TMEM129A0AVI4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TMEM129A0AVI4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 AGAP10P-201ENST00000454844 2418 ntBASIC13.22□□□□□ -0.29
TMEM129A0AVI4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 MSTO2P-201ENST00000314835 1709 ntBASIC13.22□□□□□ -0.29
TMEM129A0AVI4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM129A0AVI4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 614 ms