Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC015818.8-201ENST00000587907 1519 ntBASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC011474.4-201ENST00000623523 2076 ntBASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HLA-K-203ENST00000430151 1046 ntBASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AP001258.2-201ENST00000529891 490 ntBASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MST1P2-201ENST00000457982 2291 ntBASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms