Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 YBX1P5-201ENST00000509441 847 ntBASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 AC069262.1-201ENST00000539058 672 ntBASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 BX539320.1-201ENST00000623759 877 ntBASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 PRSS30P-206ENST00000641773 873 ntBASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 TUBB8P4-201ENST00000511806 1324 ntBASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV18A0A075B6X5 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 DNAJB3-201ENST00000446806 729 ntBASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 AC073592.8-201ENST00000624126 511 ntBASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 NCLP1-201ENST00000445357 1963 ntBASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 AC087499.5-201ENST00000452760 1342 ntBASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV18A0A075B6X5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.58□□□□□ -0.39
TRAV18A0A075B6X5 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.58□□□□□ -0.39
TRAV18A0A075B6X5 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 PCDHB18P-202ENST00000526308 3197 ntBASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TRAV18A0A075B6X5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms