Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 SIGLEC18P-201ENST00000602271 909 ntBASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 AC087045.2-201ENST00000606279 1003 ntBASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 AC007881.3-201ENST00000608897 607 ntBASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 YRDCP1-201ENST00000621419 643 ntBASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRG3Q9Y2Y8 AP002353.1-201ENST00000528257 1599 ntBASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 DUTP3-201ENST00000450025 415 ntBASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 NPM1P43-201ENST00000558669 786 ntBASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 AC005632.3-201ENST00000605544 308 ntBASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 RN7SL736P-201ENST00000613111 269 ntBASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.53■□□□□ 0.08
PRG3Q9Y2Y8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 AC144831.1-201ENST00000573312 2656 ntBASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 KRT17P5-201ENST00000332088 839 ntBASIC15.52■□□□□ 0.08
PRG3Q9Y2Y8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms