Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4Q9NQC3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4Q9NQC3 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4Q9NQC3 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4Q9NQC3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4Q9NQC3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RTN4Q9NQC3 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AC016397.2-201ENST00000624848 1985 ntBASIC17.5■□□□□ 0.39
RTN4Q9NQC3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AL049829.1-201ENST00000465411 156 ntBASIC17.5■□□□□ 0.39
RTN4Q9NQC3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AP002472.1-201ENST00000577490 586 ntBASIC17.5■□□□□ 0.39
RTN4Q9NQC3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 SLC25A6P4-201ENST00000586535 553 ntBASIC17.5■□□□□ 0.39
RTN4Q9NQC3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AC064836.3-201ENST00000607928 673 ntBASIC17.5■□□□□ 0.39
RTN4Q9NQC3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 SPTSSB-204ENST00000617024 1292 ntBASIC17.5■□□□□ 0.39
RTN4Q9NQC3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 AC008026.3-201ENST00000583426 1707 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN4Q9NQC3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 AC034105.1-201ENST00000563488 319 ntBASIC17.49■□□□□ 0.39
RTN4Q9NQC3 AC145285.3-201ENST00000564603 959 ntBASIC17.49■□□□□ 0.39
RTN4Q9NQC3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 REXO1L1P-201ENST00000379010 6598 ntBASIC17.49■□□□□ 0.39
RTN4Q9NQC3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms