Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 AL096828.3-201ENST00000615354 462 ntBASIC15.46■□□□□ 0.07
CD248Q9HCU0 AL645728.2-202ENST00000641679 227 ntBASIC15.46■□□□□ 0.07
CD248Q9HCU0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CD248Q9HCU0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CD248Q9HCU0 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD248Q9HCU0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD248Q9HCU0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CD248Q9HCU0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.46■□□□□ 0.06
CD248Q9HCU0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CD248Q9HCU0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.46■□□□□ 0.06
CD248Q9HCU0 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.46■□□□□ 0.06
CD248Q9HCU0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.06
CD248Q9HCU0 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD248Q9HCU0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CD248Q9HCU0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 EIF3FP3-201ENST00000434851 1086 ntBASIC15.45■□□□□ 0.06
CD248Q9HCU0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 AP001258.2-201ENST00000529891 490 ntBASIC15.45■□□□□ 0.06
CD248Q9HCU0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 AL158070.2-201ENST00000623713 1621 ntBASIC15.45■□□□□ 0.06
CD248Q9HCU0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CD248Q9HCU0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CD248Q9HCU0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 MTX1P1-201ENST00000440904 838 ntBASIC15.44■□□□□ 0.06
CD248Q9HCU0 AC004898.1-201ENST00000451057 766 ntBASIC15.44■□□□□ 0.06
CD248Q9HCU0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CD248Q9HCU0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.44■□□□□ 0.06
CD248Q9HCU0 ENPP7P14-201ENST00000621765 1040 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms