Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 TCAM1P-207ENST00000485295 1537 ntBASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 AC090643.2-201ENST00000623442 2029 ntBASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 LDHBP1-201ENST00000455730 1119 ntBASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 AC008723.1-201ENST00000506922 207 ntBASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 AC005618.3-201ENST00000624928 458 ntBASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KIAA1549Q9HCM3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 AC092978.1-202ENST00000637590 1327 ntBASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 RN7SL555P-201ENST00000584742 339 ntBASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 AC007881.3-201ENST00000608897 607 ntBASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 AC051619.9-201ENST00000623237 597 ntBASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.83□□□□□ -0.35
KIAA1549Q9HCM3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
KIAA1549Q9HCM3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms