Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 AC092658.1-201ENST00000505836 891 ntBASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 AC092552.1-201ENST00000547243 906 ntBASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 COX11-210ENST00000639671 696 ntBASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM55Q9BYV6 Z97205.2-201ENST00000564697 1639 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AC073548.1-201ENST00000624088 1882 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AC023794.5-201ENST00000564380 2157 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AL121723.1-201ENST00000445194 1519 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ANKRD19P-201ENST00000338192 862 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 KRT223P-202ENST00000449164 1292 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AC104596.2-201ENST00000512793 793 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AC010319.3-201ENST00000597028 470 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 LINC01115-203ENST00000606068 577 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AL591122.2-201ENST00000624125 1853 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms