Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.79■□□□□ 0.28
ARID3AQ99856 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.79■□□□□ 0.28
ARID3AQ99856 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.79■□□□□ 0.28
ARID3AQ99856 SRD5A3P1-201ENST00000603021 949 ntBASIC16.79■□□□□ 0.28
ARID3AQ99856 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ARID3AQ99856 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARID3AQ99856 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.78■□□□□ 0.28
ARID3AQ99856 PAM-203ENST00000346918 3302 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 AL035633.1-201ENST00000406139 838 ntBASIC16.78■□□□□ 0.28
ARID3AQ99856 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.78■□□□□ 0.28
ARID3AQ99856 GNAQP1-201ENST00000444815 1067 ntBASIC16.78■□□□□ 0.28
ARID3AQ99856 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ARID3AQ99856 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.78■□□□□ 0.28
ARID3AQ99856 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.78■□□□□ 0.28
ARID3AQ99856 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.78■□□□□ 0.28
ARID3AQ99856 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
ARID3AQ99856 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.78■□□□□ 0.28
ARID3AQ99856 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 AJ011932.1-201ENST00000621707 465 ntBASIC16.78■□□□□ 0.28
ARID3AQ99856 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 AL121723.1-201ENST00000445194 1519 ntBASIC16.78■□□□□ 0.28
ARID3AQ99856 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.78■□□□□ 0.28
ARID3AQ99856 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ARID3AQ99856 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.78■□□□□ 0.28
ARID3AQ99856 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARID3AQ99856 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.78■□□□□ 0.28
ARID3AQ99856 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ARID3AQ99856 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID3AQ99856 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID3AQ99856 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID3AQ99856 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID3AQ99856 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ARID3AQ99856 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC16.77■□□□□ 0.28
ARID3AQ99856 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID3AQ99856 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
ARID3AQ99856 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ARID3AQ99856 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.77■□□□□ 0.28
ARID3AQ99856 TOMM22P5-201ENST00000416399 439 ntBASIC16.77■□□□□ 0.28
ARID3AQ99856 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.77■□□□□ 0.28
ARID3AQ99856 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.77■□□□□ 0.28
ARID3AQ99856 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.77■□□□□ 0.28
ARID3AQ99856 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.77■□□□□ 0.28
ARID3AQ99856 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.77■□□□□ 0.28
ARID3AQ99856 AL158212.4-201ENST00000624062 1286 ntBASIC16.77■□□□□ 0.28
ARID3AQ99856 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARID3AQ99856 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ARID3AQ99856 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ARID3AQ99856 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ARID3AQ99856 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
ARID3AQ99856 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ARID3AQ99856 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ARID3AQ99856 PCDHA5-203ENST00000614258 4248 ntBASIC16.77■□□□□ 0.27
ARID3AQ99856 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms