Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 AC132938.2-201ENST00000579188 680 ntBASIC15.46■□□□□ 0.07
TRIM11Q96F44 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 AL591163.1-201ENST00000641757 987 ntBASIC15.46■□□□□ 0.07
TRIM11Q96F44 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM11Q96F44 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM11Q96F44 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM11Q96F44 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM11Q96F44 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM11Q96F44 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM11Q96F44 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM11Q96F44 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM11Q96F44 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM11Q96F44 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM11Q96F44 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM11Q96F44 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TRIM11Q96F44 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM11Q96F44 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM11Q96F44 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM11Q96F44 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM11Q96F44 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 AC005840.4-201ENST00000541242 2494 ntBASIC15.45■□□□□ 0.06
TRIM11Q96F44 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 CICP16-201ENST00000502609 2813 ntBASIC15.45■□□□□ 0.06
TRIM11Q96F44 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.45■□□□□ 0.06
TRIM11Q96F44 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM11Q96F44 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM11Q96F44 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 AHCYP2-201ENST00000430630 1300 ntBASIC15.44■□□□□ 0.06
TRIM11Q96F44 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 USP17L6P-201ENST00000382470 1197 ntBASIC15.44■□□□□ 0.06
TRIM11Q96F44 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms