Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RPGRQ92834 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RPGRQ92834 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.76■□□□□ 0.43
RPGRQ92834 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.76■□□□□ 0.43
RPGRQ92834 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.76■□□□□ 0.43
RPGRQ92834 AC093909.3-201ENST00000504783 336 ntBASIC17.76■□□□□ 0.43
RPGRQ92834 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.76■□□□□ 0.43
RPGRQ92834 NDUFB10P1-201ENST00000567319 521 ntBASIC17.76■□□□□ 0.43
RPGRQ92834 AL021707.6-201ENST00000609212 491 ntBASIC17.76■□□□□ 0.43
RPGRQ92834 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.76■□□□□ 0.43
RPGRQ92834 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.76■□□□□ 0.43
RPGRQ92834 LINC00244-201ENST00000625073 613 ntBASIC17.76■□□□□ 0.43
RPGRQ92834 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.76■□□□□ 0.43
RPGRQ92834 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RPGRQ92834 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.76■□□□□ 0.43
RPGRQ92834 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RPGRQ92834 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.76■□□□□ 0.43
RPGRQ92834 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RPGRQ92834 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 CTBP2P8-201ENST00000422584 1330 ntBASIC17.75■□□□□ 0.43
RPGRQ92834 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RPGRQ92834 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RPGRQ92834 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 AC234644.1-201ENST00000406065 370 ntBASIC17.75■□□□□ 0.43
RPGRQ92834 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 AC006987.1-201ENST00000413610 527 ntBASIC17.75■□□□□ 0.43
RPGRQ92834 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 RN7SL23P-201ENST00000484055 275 ntBASIC17.75■□□□□ 0.43
RPGRQ92834 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 AC095040.1-201ENST00000513286 675 ntBASIC17.75■□□□□ 0.43
RPGRQ92834 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.75■□□□□ 0.43
RPGRQ92834 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.75■□□□□ 0.43
RPGRQ92834 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.75■□□□□ 0.43
RPGRQ92834 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.75■□□□□ 0.43
RPGRQ92834 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RPGRQ92834 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
RPGRQ92834 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPGRQ92834 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.74■□□□□ 0.43
RPGRQ92834 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.74■□□□□ 0.43
RPGRQ92834 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
RPGRQ92834 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.74■□□□□ 0.43
RPGRQ92834 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.74■□□□□ 0.43
RPGRQ92834 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.74■□□□□ 0.43
RPGRQ92834 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.74■□□□□ 0.43
RPGRQ92834 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.74■□□□□ 0.43
RPGRQ92834 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.74■□□□□ 0.43
RPGRQ92834 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPGRQ92834 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RPGRQ92834 SORD2P-201ENST00000558556 1069 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms