Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AC067750.1-201ENST00000608826 6545 ntBASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AC005077.2-201ENST00000449786 690 ntBASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AC021723.1-201ENST00000486306 515 ntBASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AC044849.1-201ENST00000519737 1188 ntBASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AL136301.1-201ENST00000615830 422 ntBASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDND2Q8NHS1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 NKAIN1P1-201ENST00000435754 582 ntBASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC138696.2-201ENST00000607376 223 ntBASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC138649.2-201ENST00000615886 705 ntBASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 AC011840.2-201ENST00000563063 1520 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms