Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC008622.3-201ENST00000621170 600 ntBASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 PRAL-201ENST00000624952 3286 ntBASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.62■□□□□ 0.57
COL22A1Q8NFW1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 SNORD88B-201ENST00000408454 91 ntBASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 HMGA1P1-201ENST00000415560 1062 ntBASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 IGHVII-74-1-201ENST00000517572 241 ntBASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.61■□□□□ 0.57
COL22A1Q8NFW1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 NDUFB2P1-201ENST00000506966 295 ntBASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 CA5BP1-205ENST00000435806 1064 ntBASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 SRP9P1-201ENST00000445874 261 ntBASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC18.6■□□□□ 0.57
COL22A1Q8NFW1 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms