Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN22Q8N7P3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 AC114271.1-201ENST00000612689 2813 ntBASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 AL162726.2-201ENST00000438986 1017 ntBASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 TERF1P3-201ENST00000505638 1227 ntBASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 AP001063.1-201ENST00000568332 529 ntBASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 TP53TG3HP-202ENST00000569755 579 ntBASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN22Q8N7P3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.33□□□□□ -0.27
CLDN22Q8N7P3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.33□□□□□ -0.27
CLDN22Q8N7P3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN22Q8N7P3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN22Q8N7P3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN22Q8N7P3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
CLDN22Q8N7P3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 AC245100.3-201ENST00000441281 285 ntBASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 AC022137.2-201ENST00000503482 481 ntBASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN22Q8N7P3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms