Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC155Q8N6L0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC155Q8N6L0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AL157791.1-201ENST00000553667 1699 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 ACTG1P2-201ENST00000415776 1125 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 ACTG1P11-201ENST00000425411 1125 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 EEF1DP6-201ENST00000449232 372 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AL353637.1-201ENST00000451571 732 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AC012618.1-201ENST00000461223 412 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AC026434.2-201ENST00000506094 1078 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 MIR4683-201ENST00000579659 81 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 RN7SL574P-201ENST00000581512 297 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AC005324.6-201ENST00000587972 613 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 SPCS2P2-201ENST00000603270 608 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AL358472.3-201ENST00000608147 415 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AC068587.8-201ENST00000641239 219 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 LINC01230-201ENST00000625222 3017 ntBASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC155Q8N6L0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 MIR33B-201ENST00000385104 96 ntBASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 AL596276.2-201ENST00000447525 331 ntBASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 AC104073.2-201ENST00000453737 312 ntBASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 AC125604.1-201ENST00000496255 707 ntBASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 AC090164.2-201ENST00000611487 516 ntBASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC155Q8N6L0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC155Q8N6L0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms