Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SAMD11P1-201ENST00000571429 661 ntBASIC13.07□□□□□ -0.32
LRRC28Q86X40 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AL033527.5-201ENST00000641382 801 ntBASIC13.07□□□□□ -0.32
LRRC28Q86X40 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 AL360270.3-201ENST00000609118 1348 ntBASIC13.07□□□□□ -0.32
LRRC28Q86X40 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LRRC28Q86X40 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRC28Q86X40 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AC111170.3-201ENST00000624282 2464 ntBASIC13.06□□□□□ -0.32
LRRC28Q86X40 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AL512384.1-201ENST00000406683 331 ntBASIC13.06□□□□□ -0.32
LRRC28Q86X40 AC134915.1-201ENST00000426461 574 ntBASIC13.06□□□□□ -0.32
LRRC28Q86X40 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRC28Q86X40 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LRRC28Q86X40 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRC28Q86X40 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRC28Q86X40 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRC28Q86X40 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRC28Q86X40 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRC28Q86X40 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRC28Q86X40 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRC28Q86X40 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRC28Q86X40 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRC28Q86X40 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms