Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AL359881.3-201ENST00000602640 1721 ntBASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AC132192.2-201ENST00000596206 1147 ntBASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AC009955.4-201ENST00000597192 544 ntBASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AL023803.2-201ENST00000620080 638 ntBASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AC006033.1-201ENST00000440505 426 ntBASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AC004898.1-201ENST00000451057 766 ntBASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AC022447.6-201ENST00000515522 438 ntBASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 MIR4525-201ENST00000580000 75 ntBASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AL022328.3-201ENST00000607943 679 ntBASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AL008638.5-201ENST00000623814 1298 ntBASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 AL354702.1-201ENST00000442006 1960 ntBASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TTC39BQ5VTQ0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TTC39BQ5VTQ0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms