Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 CASP3-205ENST00000517513 964 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC005777.1-201ENST00000588332 187 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 GRPEL2P1-201ENST00000453145 339 ntBASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 CCND3P2-201ENST00000579393 537 ntBASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 AC103592.1-201ENST00000394513 664 ntBASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 U73169.1-201ENST00000395152 367 ntBASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 AC092903.1-201ENST00000466506 262 ntBASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 AP001462.1-201ENST00000594089 452 ntBASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 POR-201ENST00000394893 2532 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 OR7E12P-201ENST00000344740 973 ntBASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13DQ5THJ4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
VPS13DQ5THJ4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms