Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 CICP14-201ENST00000629111 2732 ntBASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 Z69890.1-201ENST00000382990 339 ntBASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 BANF1P3-201ENST00000412556 261 ntBASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 AP003398.1-201ENST00000531124 318 ntBASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 RN7SL596P-201ENST00000582123 288 ntBASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 MIR3188-201ENST00000583494 85 ntBASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 AP001184.1-201ENST00000637936 376 ntBASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 CYP4F23P-201ENST00000593402 1579 ntBASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTC1Q2NKJ3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 ZBED1P1-201ENST00000502364 1930 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AL137784.3-201ENST00000623858 2288 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC117489.1-201ENST00000625169 3217 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AL645933.1-201ENST00000440087 609 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC027237.1-201ENST00000560942 655 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC084781.1-201ENST00000613737 656 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC027601.3-201ENST00000622907 509 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC138466.4-201ENST00000623965 852 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC005618.3-201ENST00000624928 458 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 KRT18P9-201ENST00000604826 1300 ntBASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CTC1Q2NKJ3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms