Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SSBP1Q04837 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 PDIA3P1-201ENST00000471856 1510 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SSBP1Q04837 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SSBP1Q04837 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP1Q04837 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP1Q04837 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SSBP1Q04837 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP1Q04837 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.36□□□□□ -0.43
SSBP1Q04837 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SSBP1Q04837 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP1Q04837 AL450487.1-201ENST00000426799 995 ntBASIC12.36□□□□□ -0.43
SSBP1Q04837 CEND1P1-201ENST00000451006 455 ntBASIC12.36□□□□□ -0.43
SSBP1Q04837 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.36□□□□□ -0.43
SSBP1Q04837 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP1Q04837 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP1Q04837 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.36□□□□□ -0.43
SSBP1Q04837 AC036164.1-201ENST00000570544 333 ntBASIC12.36□□□□□ -0.43
SSBP1Q04837 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.36□□□□□ -0.43
SSBP1Q04837 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 AGAP12P-201ENST00000585227 2359 ntBASIC12.36□□□□□ -0.43
SSBP1Q04837 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP1Q04837 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SSBP1Q04837 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP1Q04837 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP1Q04837 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP1Q04837 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
SSBP1Q04837 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SSBP1Q04837 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP1Q04837 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP1Q04837 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP1Q04837 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 AL139400.1-201ENST00000366220 510 ntBASIC12.35□□□□□ -0.43
SSBP1Q04837 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP1Q04837 ARSEP1-201ENST00000420443 635 ntBASIC12.35□□□□□ -0.43
SSBP1Q04837 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.35□□□□□ -0.43
SSBP1Q04837 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 AC009078.2-202ENST00000463353 338 ntBASIC12.35□□□□□ -0.43
SSBP1Q04837 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.35□□□□□ -0.43
SSBP1Q04837 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
SSBP1Q04837 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP1Q04837 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP1Q04837 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.35□□□□□ -0.43
SSBP1Q04837 AL049840.4-201ENST00000602422 811 ntBASIC12.35□□□□□ -0.43
SSBP1Q04837 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP1Q04837 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP1Q04837 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms