Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRPXP78539 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SRPXP78539 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.08□□□□□ -0.48
SRPXP78539 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 AC004241.5-201ENST00000623870 2448 ntBASIC12.07□□□□□ -0.48
SRPXP78539 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SRPXP78539 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 AC139712.1-201ENST00000378256 1875 ntBASIC12.07□□□□□ -0.48
SRPXP78539 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 USP17L6P-201ENST00000382470 1197 ntBASIC12.07□□□□□ -0.48
SRPXP78539 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 AC114501.2-201ENST00000439631 535 ntBASIC12.07□□□□□ -0.48
SRPXP78539 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.07□□□□□ -0.48
SRPXP78539 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 GCOM2-201ENST00000509133 1104 ntBASIC12.07□□□□□ -0.48
SRPXP78539 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 PGAM5P1-201ENST00000518923 814 ntBASIC12.07□□□□□ -0.48
SRPXP78539 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 AC103988.2-201ENST00000561804 725 ntBASIC12.07□□□□□ -0.48
SRPXP78539 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 MIR4469-201ENST00000583919 79 ntBASIC12.07□□□□□ -0.48
SRPXP78539 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.07□□□□□ -0.48
SRPXP78539 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.07□□□□□ -0.48
SRPXP78539 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.07□□□□□ -0.48
SRPXP78539 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 MIR497HG-202ENST00000572453 3838 ntBASIC12.07□□□□□ -0.48
SRPXP78539 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SRPXP78539 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.06□□□□□ -0.48
SRPXP78539 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.06□□□□□ -0.48
SRPXP78539 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SRPXP78539 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.06□□□□□ -0.48
SRPXP78539 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms