Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 SORD2P-201ENST00000558556 1069 ntBASIC17.02■□□□□ 0.31
CNTNAP1P78357 AC023968.2-201ENST00000560593 1049 ntBASIC17.02■□□□□ 0.31
CNTNAP1P78357 AC005586.2-201ENST00000563946 837 ntBASIC17.02■□□□□ 0.31
CNTNAP1P78357 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC17.02■□□□□ 0.31
CNTNAP1P78357 AL133467.4-201ENST00000602953 725 ntBASIC17.02■□□□□ 0.31
CNTNAP1P78357 AL450487.2-201ENST00000615934 407 ntBASIC17.02■□□□□ 0.31
CNTNAP1P78357 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP1P78357 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 AL354702.1-201ENST00000442006 1960 ntBASIC17.01■□□□□ 0.31
CNTNAP1P78357 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 AL591122.2-201ENST00000624125 1853 ntBASIC17.01■□□□□ 0.31
CNTNAP1P78357 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 RNVU1-8-201ENST00000364272 125 ntBASIC17.01■□□□□ 0.31
CNTNAP1P78357 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 AL121949.3-201ENST00000406684 385 ntBASIC17.01■□□□□ 0.31
CNTNAP1P78357 AL512599.1-201ENST00000430724 685 ntBASIC17.01■□□□□ 0.31
CNTNAP1P78357 AC098934.1-203ENST00000442868 1262 ntBASIC17.01■□□□□ 0.31
CNTNAP1P78357 AC092896.1-201ENST00000465850 380 ntBASIC17.01■□□□□ 0.31
CNTNAP1P78357 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 NDUFB10P1-201ENST00000567319 521 ntBASIC17.01■□□□□ 0.31
CNTNAP1P78357 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP1P78357 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP1P78357 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTNAP1P78357 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP1P78357 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17■□□□□ 0.31
CNTNAP1P78357 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTNAP1P78357 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP1P78357 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTNAP1P78357 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CNTNAP1P78357 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CNTNAP1P78357 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CNTNAP1P78357 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 GEMIN8P4-201ENST00000380526 729 ntBASIC17■□□□□ 0.31
CNTNAP1P78357 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP1P78357 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP1P78357 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNTNAP1P78357 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP1P78357 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP1P78357 AC090820.1-201ENST00000519722 591 ntBASIC17■□□□□ 0.31
CNTNAP1P78357 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC17■□□□□ 0.31
CNTNAP1P78357 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP1P78357 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP1P78357 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP1P78357 MIR4254-201ENST00000581063 76 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms