Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AL157407.1-201ENST00000435784 904 ntBASIC12.76□□□□□ -0.37
HIST1H3AP68431 U91328.1-201ENST00000437528 223 ntBASIC12.76□□□□□ -0.37
HIST1H3AP68431 AL645933.1-201ENST00000440087 609 ntBASIC12.76□□□□□ -0.37
HIST1H3AP68431 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AC100850.1-201ENST00000506768 649 ntBASIC12.76□□□□□ -0.37
HIST1H3AP68431 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 MIR4783-201ENST00000580343 82 ntBASIC12.76□□□□□ -0.37
HIST1H3AP68431 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AC009955.4-201ENST00000597192 544 ntBASIC12.76□□□□□ -0.37
HIST1H3AP68431 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 TMBIM7P-202ENST00000641474 1516 ntBASIC12.76□□□□□ -0.37
HIST1H3AP68431 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H3AP68431 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
HIST1H3AP68431 AC090643.2-201ENST00000623442 2029 ntBASIC12.76□□□□□ -0.37
HIST1H3AP68431 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 ANKRD19P-201ENST00000338192 862 ntBASIC12.75□□□□□ -0.37
HIST1H3AP68431 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 RAB43P1-201ENST00000561790 589 ntBASIC12.75□□□□□ -0.37
HIST1H3AP68431 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 AC117489.1-201ENST00000625169 3217 ntBASIC12.75□□□□□ -0.37
HIST1H3AP68431 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H3AP68431 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H3AP68431 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H3AP68431 AL122018.1-201ENST00000446607 2310 ntBASIC12.74□□□□□ -0.37
HIST1H3AP68431 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H3AP68431 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms