Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.2■□□□□ 0.02
HADHBP55084 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.2■□□□□ 0.02
HADHBP55084 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HADHBP55084 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
HADHBP55084 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 AL359183.1-201ENST00000623796 2132 ntBASIC15.2■□□□□ 0.02
HADHBP55084 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HADHBP55084 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.2■□□□□ 0.02
HADHBP55084 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HADHBP55084 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.2■□□□□ 0.02
HADHBP55084 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HADHBP55084 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HADHBP55084 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.2■□□□□ 0.02
HADHBP55084 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHBP55084 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHBP55084 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HADHBP55084 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.19■□□□□ 0.02
HADHBP55084 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HADHBP55084 TTTY23B-201ENST00000442790 549 ntBASIC15.19■□□□□ 0.02
HADHBP55084 CNN2P10-201ENST00000443067 918 ntBASIC15.19■□□□□ 0.02
HADHBP55084 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
HADHBP55084 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.19■□□□□ 0.02
HADHBP55084 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HADHBP55084 AC021016.3-201ENST00000608367 477 ntBASIC15.19■□□□□ 0.02
HADHBP55084 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.19■□□□□ 0.02
HADHBP55084 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HADHBP55084 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.19■□□□□ 0.02
HADHBP55084 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.19■□□□□ 0.02
HADHBP55084 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.19■□□□□ 0.02
HADHBP55084 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HADHBP55084 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HADHBP55084 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
HADHBP55084 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HADHBP55084 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HADHBP55084 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHBP55084 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.18■□□□□ 0.02
HADHBP55084 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHBP55084 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHBP55084 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.18■□□□□ 0.02
HADHBP55084 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.18■□□□□ 0.02
HADHBP55084 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 AC112492.5-201ENST00000421897 457 ntBASIC15.18■□□□□ 0.02
HADHBP55084 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.18■□□□□ 0.02
HADHBP55084 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.18■□□□□ 0.02
HADHBP55084 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.18■□□□□ 0.02
HADHBP55084 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.18■□□□□ 0.02
HADHBP55084 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.18■□□□□ 0.02
HADHBP55084 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.18■□□□□ 0.02
HADHBP55084 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 AC027307.3-201ENST00000594262 1100 ntBASIC15.18■□□□□ 0.02
HADHBP55084 MIR6720-201ENST00000611664 98 ntBASIC15.18■□□□□ 0.02
HADHBP55084 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 AC090386.2-201ENST00000623010 1039 ntBASIC15.18■□□□□ 0.02
HADHBP55084 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.18■□□□□ 0.02
HADHBP55084 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HADHBP55084 AC007952.5-201ENST00000572818 1486 ntBASIC15.18■□□□□ 0.02
HADHBP55084 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms