Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AP001184.1-201ENST00000637936 376 ntBASIC12.61□□□□□ -0.39
HCFC1P51610 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.61□□□□□ -0.39
HCFC1P51610 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 AC009093.10-201ENST00000641956 1442 ntBASIC12.6□□□□□ -0.39
HCFC1P51610 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HCFC1P51610 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.6□□□□□ -0.39
HCFC1P51610 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.6□□□□□ -0.39
HCFC1P51610 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.6□□□□□ -0.39
HCFC1P51610 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 AL009178.2-201ENST00000597278 2719 ntBASIC12.6□□□□□ -0.39
HCFC1P51610 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
HCFC1P51610 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HCFC1P51610 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.6□□□□□ -0.39
HCFC1P51610 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
HCFC1P51610 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.59□□□□□ -0.39
HCFC1P51610 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HCFC1P51610 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 RN7SKP109-201ENST00000410592 316 ntBASIC12.59□□□□□ -0.39
HCFC1P51610 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.59□□□□□ -0.39
HCFC1P51610 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.59□□□□□ -0.39
HCFC1P51610 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.59□□□□□ -0.39
HCFC1P51610 AC011247.3-201ENST00000603297 438 ntBASIC12.59□□□□□ -0.39
HCFC1P51610 AP000322.3-201ENST00000608665 388 ntBASIC12.59□□□□□ -0.39
HCFC1P51610 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.59□□□□□ -0.39
HCFC1P51610 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HCFC1P51610 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.59□□□□□ -0.39
HCFC1P51610 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HCFC1P51610 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 RN7SL277P-201ENST00000481521 288 ntBASIC12.59□□□□□ -0.39
HCFC1P51610 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.59□□□□□ -0.39
HCFC1P51610 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HCFC1P51610 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
HCFC1P51610 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
HCFC1P51610 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.59□□□□□ -0.39
HCFC1P51610 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HCFC1P51610 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms